Genetics of Aquatic Organisms
2019, Vol 3, Num, 2 (Pages: 57-65)
Genetic Variation Study within (Ompok bimaculatus & Clupisoma sinensis) Populations in Samarra Dam Middle of Iraq and Shatt Al-Arab Southern of Iraq belonging to Tigris River Using Mitochondrial Cytochrome b Gene
Rabeeha Mankhi Jebur 1
1 Basrah University, Marine Science Centre, Basrah, Iraq
DOI :
10.4194/2459-1831-v3_2_03
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This study was specifically aimed at Genetic Variation Study Within (Ompok
bimaculatus & Clupisoma sinensis) Populations, and evaluated partial Cytb gene
sequence of mtDNA for determining the genetic variation within Ompok bimaculatus
& Clupisoma sinensis populations in Samarra Dam Middle of Iraq and Shatt Al-Arab
Southern of Iraq belonging to Tigris River Using Mitochondrial Cytochrome b Gene.
DNA extracted from 80 specimens of the two species of interest from two stations
were analyzed. The Size of gene was (amplified Cytb gene) 1,118 bp long and 1,138bp
long for O. bimaculatus and C. sinensis, respectively. By using Software DnaSP v5.1, the
study revealed that there are two individual species in Samarra Dam and 3 in Shatt-AlArab river whereas 2 haplotypes in C. sinensis population in Shatt Al-Arab and only one
hap. In Samarra Dam, there is also Sequencing of Cytb fragments. According to the
molecular variance analysis, analyzes of nucleotide diversity and haplotypes pattern
were performed separately for each community using the DnaSP v5.10 program. The
analysis revealed that there are two types of specific haplotypes in (O. bimaculatus) in
the Samarra Dam and 3 of the haplotypes patterns observed in the Shatt al-Arab River,
while there are two haplotypes patterns in (St. Sinensis) in the Shatt al-Arab and 1 of
haplotypes in Samarra Dam. Low range values of nucleotide and haplotype diversity
for both species in Shatt Al-Arab river populations were revealed which refer to low
genetic variation within each population in Shatt Al-Arab. As well as low range values
of π and Hd for (O. bimaculatus) species in Samarra Dam populations which revealed
low genetic variation while no genetic variation in (C. sinensis) population.
Keywords :
Genetic variation, AMOVA, Haplotype, Cytb Gene, Nucleotide diversity